back to PRO homepage
  Home |   Linked Open Data |   Browse |   Search |   Statistics |   Download
 RACE-PRO
 PRO tracker
 Community
 PRO Consortium
 Publications
 Documentation

Protein Ontology Linked Open Data

Data Dumps

Release 63.0 (2021-05-10)
(see VoID.ttl for Dataset descriptions. Previous releases can be found here). The statistics for PRO database can be found at here.
Dataset RDF Metrics (Virtuoso)
Named Graph Triples Classes Entities Subjects Predicates Objects
pro <http://purl.obolibrary.org/obo/pr> 12,285,399 8 2,069,357 2,359,312 48 3,227,223
paf <http://pir.georgetown.edu/pro/paf> 91,687 4 8,311 19,729 22 31,570
pro-ensembl-closeMatch-linkset <https://lod.proconsortium.org/ensembl-closeMatch> 94 1 24 24 4 47
pro-ensemblbacteria-closeMatch-linkset <https://lod.proconsortium.org/ensemblbacteria-closeMatch> 2,732 1 493 493 4 1,361
pro-hgnc-closeMatch-linkset <https://lod.proconsortium.org/hgnc-closeMatch> 72,321 1 18,258 18,258 4 35,803
pro-mgi-closeMatch-linkset <https://lod.proconsortium.org/mgi-closeMatch> 61,447 1 15,522 15,522 4 30,401
pro-ncbigene-closeMatch-linkset <https://lod.proconsortium.org/ncbigene-closeMatch> 8,556 1 1,678 1,678 4 4,243
pro-reactome-closeMatch-linkset <https://lod.proconsortium.org/reactome-closeMatch> 48,961 1 10,172 10,172 4 24,260
pro-reactome-exactMatch-linkset <https://lod.proconsortium.org/reactome-exactMatch> 65,922 1 11,219 11,219 5 25,374
pro-rgd-closeMatch-linkset <https://lod.proconsortium.org/rgd-closeMatch> 29,110 1 7,360 7,360 4 14,389
pro-sgd-closeMatch-linkset <https://lod.proconsortium.org/sgd-closeMatch> 4,974 1 1,261 1,261 4 2,453
pro-uniprotkb-closeMatch-linkset <https://lod.proconsortium.org/uniprotkb-closeMatch> 382,414 1 55,050 55,050 4 185,775
pro-uniprotkb-exactMatch-linkset <https://lod.proconsortium.org/uniprotkb-exactMatch> 871,696 1 176,237 176,237 5 337,022
pro-uniprotkbvar-closeMatch-linkset <https://lod.proconsortium.org/uniprotkbvar-closeMatch> 1,003 1 41 41 4 500
pro-uniprotkbvar-exactMatch-linkset <https://lod.proconsortium.org/uniprotkbvar-exactMatch> 2,263 1 463 463 5 875
pro-wormbase-closeMatch-linkset <https://lod.proconsortium.org/wormbase-closeMatch> 7,087 1 1,794 1,794 4 3,500
void <https://sparql.proconsortium.org/.well-known/void> 2,368 7 74 292 63 605

SPARQL queries used to calculate statistics can be found here.


Dataset File Name Format File Size (Bytes) MD5
pro.owl pro.owl application/rdf+xml 1,223,936,510 143f6d051471ae2b911bde1da1f48d4d
pro pro.ttl text/turtle 699,163,999 7ade96db9a45e7aeecef09fdcad27785
paf.rdf paf.rdf application/rdf+xml 11,889,606 1b566ccce26af343b218c5155ff217e0
paf paf.ttl text/turtle 2,952,369 6f62676223c817e8a9fcfc53fd6c8989
pro-ensembl-closeMatch-linkset pro-ensembl-closeMatch-linkset.ttl text/turtle 5,440 ecb8311ef4b67d078edadfc43bdfa2b9
pro-ensemblbacteria-closeMatch-linkset pro-ensemblbacteria-closeMatch-linkset.ttl text/turtle 143,648 7dba393e37a824c04fd8bd6859644dd8
pro-hgnc-closeMatch-linkset pro-hgnc-closeMatch-linkset.ttl text/turtle 3,408,757 e953e967aca3aa5d5aa72643df29234d
pro-mgi-closeMatch-linkset pro-mgi-closeMatch-linkset.ttl text/turtle 2,931,058 052f53fc6a681fc27e2766ec234e412e
pro-ncbigene-closeMatch-linkset pro-ncbigene-closeMatch-linkset.ttl text/turtle 428,543 1e667c9b071905028fcae9502f55a31c
pro-reactome-closeMatch-linkset pro-reactome-closeMatch-linkset.ttl text/turtle 2,617,967 d818f9f8f435b86c9968f28f0c975dd9
pro-reactome-exactMatch-linkset pro-reactome-exactMatch-linkset.ttl text/turtle 3,620,035 8792e6ba16f62b18b19f4ea892681397
pro-rgd-closeMatch-linkset pro-rgd-closeMatch-linkset.ttl text/turtle 1,376,181 b5bf135986d6862702ff827eca545ec0
pro-sgd-closeMatch-linkset pro-sgd-closeMatch-linkset.ttl text/turtle 248,176 1889fde7c9f2c7cbc8def83b120e1a8c
pro-uniprotkb-closeMatch-linkset pro-uniprotkb-closeMatch-linkset.ttl text/turtle 19,601,582 0c77d61b4181fe71817780998d01d485
pro-uniprotkb-exactMatch-linkset pro-uniprotkb-exactMatch-linkset.ttl text/turtle 45,123,860 1c0172658e20039c1a9f020c52bf46dc
pro-uniprotkbvar-closeMatch-linkset pro-uniprotkbvar-closeMatch-linkset.ttl text/turtle 57,694 97774ff11540b43fdd19e8dda332ab18
pro-uniprotkbvar-exactMatch-linkset pro-uniprotkbvar-exactMatch-linkset.ttl text/turtle 134,825 7bc38bb01c5608c9d2ebe04d0e71af51
pro-wormbase-closeMatch-linkset pro-wormbase-closeMatch-linkset.ttl text/turtle 385,953 d0c83d1a4d01f090cd759fab3a446c30
void.rdf void.rdf application/rdf+xml 517,049 73e082b90c8266249b5418630462b3a4
void void.ttl text/turtle 154,510 d8e2049107d995f9380bc6b3cb17e2fd