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Protein Ontology Linked Open Data

Data Dumps

Release 69.0 (2024-02-12)
(see VoID.ttl for Dataset descriptions. Previous releases can be found here). The statistics for PRO database can be found at here.
Dataset RDF Metrics (Virtuoso)
Named Graph Triples Classes Entities Subjects Predicates Objects
pro <http://purl.obolibrary.org/obo/pr> 13,583,337 8 2,280,881 2,571,158 50 3,525,753
paf <http://pir.georgetown.edu/pro/paf> 82,733 4 7,368 17,540 22 27,859
pro-ensembl-closeMatch-linkset <https://lod.proconsortium.org/ensembl-closeMatch> 81 1 21 21 4 40
pro-ensemblbacteria-closeMatch-linkset <https://lod.proconsortium.org/ensemblbacteria-closeMatch> 2,730 1 492 492 4 1,360
pro-hgnc-closeMatch-linkset <https://lod.proconsortium.org/hgnc-closeMatch> 73,872 1 18,783 18,783 4 36,307
pro-mgi-closeMatch-linkset <https://lod.proconsortium.org/mgi-closeMatch> 64,118 1 16,326 16,326 4 31,465
pro-ncbigene-closeMatch-linkset <https://lod.proconsortium.org/ncbigene-closeMatch> 10,621 1 2,171 2,171 4 5,259
pro-reactome-closeMatch-linkset <https://lod.proconsortium.org/reactome-closeMatch> 65,033 1 11,591 11,591 4 32,254
pro-reactome-exactMatch-linkset <https://lod.proconsortium.org/reactome-exactMatch> 90,992 1 16,082 16,082 5 32,281
pro-rgd-closeMatch-linkset <https://lod.proconsortium.org/rgd-closeMatch> 30,586 1 7,769 7,769 4 15,047
pro-sgd-closeMatch-linkset <https://lod.proconsortium.org/sgd-closeMatch> 5,226 1 1,326 1,326 4 2,574
pro-uniprotkb-closeMatch-linkset <https://lod.proconsortium.org/uniprotkb-closeMatch> 413,665 1 59,083 59,083 4 193,000
pro-uniprotkb-exactMatch-linkset <https://lod.proconsortium.org/uniprotkb-exactMatch> 1,029,029 1 213,169 213,169 5 348,452
pro-uniprotkbvar-closeMatch-linkset <https://lod.proconsortium.org/uniprotkbvar-closeMatch> 1,003 1 41 41 4 500
pro-uniprotkbvar-exactMatch-linkset <https://lod.proconsortium.org/uniprotkbvar-exactMatch> 2,263 1 463 463 5 875
pro-wormbase-closeMatch-linkset <https://lod.proconsortium.org/wormbase-closeMatch> 7,529 1 1,910 1,910 4 3,710
void <https://sparql.proconsortium.org/.well-known/void> 2,368 7 74 292 63 610

SPARQL queries used to calculate statistics can be found here.


Dataset File Name Format File Size (Bytes) MD5
paf.rdf paf.rdf application/rdf+xml 10,710,000 8cd252949a7070c19882a9cba01050f9
paf paf.ttl text/turtle 2,695,257 7850c77c02254804f537cf72fedd4247
pro-ensembl-closeMatch-linkset pro-ensembl-closeMatch-linkset.ttl text/turtle 4,706 7402ad8a6daf9f58964caaf9695b6f7b
pro-ensemblbacteria-closeMatch-linkset pro-ensemblbacteria-closeMatch-linkset.ttl text/turtle 143,540 d7530008bd57ec2664dc595abca9fd1f
pro-hgnc-closeMatch-linkset pro-hgnc-closeMatch-linkset.ttl text/turtle 3,472,572 51b17946e64aff3f956800c38129187d
pro-mgi-closeMatch-linkset pro-mgi-closeMatch-linkset.ttl text/turtle 3,049,548 fef14b5042365857d038805ee17dd00d
pro-ncbigene-closeMatch-linkset pro-ncbigene-closeMatch-linkset.ttl text/turtle 531,263 dbef43747609c68fc94baeacf873d859
pro-reactome-closeMatch-linkset pro-reactome-closeMatch-linkset.ttl text/turtle 3,487,627 fda5278482221fbaa7dc1845e13fab41
pro-reactome-exactMatch-linkset pro-reactome-exactMatch-linkset.ttl text/turtle 4,914,070 56c14707a2326cd71a13b8ff2f1bb500
pro-rgd-closeMatch-linkset pro-rgd-closeMatch-linkset.ttl text/turtle 1,443,813 f9fac744c2e135f29c3673dd2d0b093d
pro-sgd-closeMatch-linkset pro-sgd-closeMatch-linkset.ttl text/turtle 260,474 28be054df6a910dd59b1933c6a47b29b
pro-uniprotkb-closeMatch-linkset pro-uniprotkb-closeMatch-linkset.ttl text/turtle 21,145,222 ca482a776271c30e6f70736ff02d46c1
pro-uniprotkb-exactMatch-linkset pro-uniprotkb-exactMatch-linkset.ttl text/turtle 52,732,871 d08df9bb3e89747cc42ed627e7b2c34f
pro-uniprotkbvar-closeMatch-linkset pro-uniprotkbvar-closeMatch-linkset.ttl text/turtle 57,694 97774ff11540b43fdd19e8dda332ab18
pro-uniprotkbvar-exactMatch-linkset pro-uniprotkbvar-exactMatch-linkset.ttl text/turtle 134,825 7bc38bb01c5608c9d2ebe04d0e71af51
pro-wormbase-closeMatch-linkset pro-wormbase-closeMatch-linkset.ttl text/turtle 409,848 39fb977a104041274f59706bb5737ecd
pro.owl pro.owl application/rdf+xml 1,375,065,349 5b19d2e418567e376ece1c1085925c98
pro pro.ttl text/turtle 786,217,178 36f8a51051a76e15d448a14d6fa0b769
void.rdf void.rdf application/rdf+xml 517,047 e57053ea1af55cdcbefb38633496c6c1
void void.ttl text/turtle 154,508 785f49c4c39e4fc6fd43a64aa7eda62f