back to PRO homepage
  Home |   Linked Open Data |   Browse |   Search |   Statistics |   Download
 RACE-PRO
 PRO tracker
 Community
 PRO Consortium
 Publications
 Documentation

Protein Ontology Linked Open Data

Data Dumps

Release 67.0 (2022-08-08)
(see VoID.ttl for Dataset descriptions. Previous releases can be found here). The statistics for PRO database can be found at here.
Dataset RDF Metrics (Virtuoso)
Named Graph Triples Classes Entities Subjects Predicates Objects
pro <http://purl.obolibrary.org/obo/pr> 12,387,055 8 2,083,475 2,372,435 48 3,249,382
paf <http://pir.georgetown.edu/pro/paf> 82,753 4 7,369 17,543 22 27,886
pro-ensembl-closeMatch-linkset <https://lod.proconsortium.org/ensembl-closeMatch> 140 1 36 36 4 69
pro-ensemblbacteria-closeMatch-linkset <https://lod.proconsortium.org/ensemblbacteria-closeMatch> 2,732 1 493 493 4 1,361
pro-hgnc-closeMatch-linkset <https://lod.proconsortium.org/hgnc-closeMatch> 73,887 1 18,786 18,786 4 36,316
pro-mgi-closeMatch-linkset <https://lod.proconsortium.org/mgi-closeMatch> 63,954 1 16,283 16,283 4 31,387
pro-ncbigene-closeMatch-linkset <https://lod.proconsortium.org/ncbigene-closeMatch> 10,833 1 2,226 2,226 4 5,362
pro-reactome-closeMatch-linkset <https://lod.proconsortium.org/reactome-closeMatch> 48,988 1 10,183 10,183 4 24,263
pro-reactome-exactMatch-linkset <https://lod.proconsortium.org/reactome-exactMatch> 65,908 1 11,216 11,216 5 25,367
pro-rgd-closeMatch-linkset <https://lod.proconsortium.org/rgd-closeMatch> 30,099 1 7,643 7,643 4 14,812
pro-sgd-closeMatch-linkset <https://lod.proconsortium.org/sgd-closeMatch> 5,212 1 1,323 1,323 4 2,567
pro-uniprotkb-closeMatch-linkset <https://lod.proconsortium.org/uniprotkb-closeMatch> 389,804 1 55,730 55,730 4 189,107
pro-uniprotkb-exactMatch-linkset <https://lod.proconsortium.org/uniprotkb-exactMatch> 875,591 1 177,250 177,250 5 337,841
pro-uniprotkbvar-closeMatch-linkset <https://lod.proconsortium.org/uniprotkbvar-closeMatch> 1,003 1 41 41 4 500
pro-uniprotkbvar-exactMatch-linkset <https://lod.proconsortium.org/uniprotkbvar-exactMatch> 2,263 1 463 463 5 875
pro-wormbase-closeMatch-linkset <https://lod.proconsortium.org/wormbase-closeMatch> 7,471 1 1,895 1,895 4 3,682
void <https://sparql.proconsortium.org/.well-known/void> 2,368 7 74 292 63 610

SPARQL queries used to calculate statistics can be found here.


Dataset File Name Format File Size (Bytes) MD5
pro.owl pro.owl application/rdf+xml 1,243,315,856 848f3be17ad29a2d7b2cf129b544e3ea
pro pro.ttl text/turtle 712,219,984 1bc803b2825abf7f13d505888cf75e07
paf.rdf paf.rdf application/rdf+xml 10,713,516 fc1b6da5e945c216d2ed8bcc2a69de03
paf paf.ttl text/turtle 2,696,663 f665a1216cb1ce9bd61bcced946f7651
pro-ensembl-closeMatch-linkset pro-ensembl-closeMatch-linkset.ttl text/turtle 7,938 431561121a22486c5e2cd1812b78b962
pro-ensemblbacteria-closeMatch-linkset pro-ensemblbacteria-closeMatch-linkset.ttl text/turtle 143,648 7dba393e37a824c04fd8bd6859644dd8
pro-hgnc-closeMatch-linkset pro-hgnc-closeMatch-linkset.ttl text/turtle 3,473,333 f8f870474261830cd8418282f64b9b29
pro-mgi-closeMatch-linkset pro-mgi-closeMatch-linkset.ttl text/turtle 3,041,790 32cf985aadc46de39b28705d2aedcca1
pro-ncbigene-closeMatch-linkset pro-ncbigene-closeMatch-linkset.ttl text/turtle 541,582 5bddd8c5740c75278e0df93491e6a677
pro-reactome-closeMatch-linkset pro-reactome-closeMatch-linkset.ttl text/turtle 2,619,356 8dc1d2fcebc54b94c76861e7982d3456
pro-reactome-exactMatch-linkset pro-reactome-exactMatch-linkset.ttl text/turtle 3,619,378 aeed4dbef9a4b6e5da13e67301f446d5
pro-rgd-closeMatch-linkset pro-rgd-closeMatch-linkset.ttl text/turtle 1,420,810 bf6b8a9bb7122fb8d7b8c6c040f1f987
pro-sgd-closeMatch-linkset pro-sgd-closeMatch-linkset.ttl text/turtle 259,800 c9134d248a5a2327f34a18029c7ce710
pro-uniprotkb-closeMatch-linkset pro-uniprotkb-closeMatch-linkset.ttl text/turtle 19,970,088 16311b92509da70a2b272701d15eae4f
pro-uniprotkb-exactMatch-linkset pro-uniprotkb-exactMatch-linkset.ttl text/turtle 45,294,573 29e0019ccffb7ece563f80165beeb85d
pro-uniprotkbvar-closeMatch-linkset pro-uniprotkbvar-closeMatch-linkset.ttl text/turtle 57,694 97774ff11540b43fdd19e8dda332ab18
pro-uniprotkbvar-exactMatch-linkset pro-uniprotkbvar-exactMatch-linkset.ttl text/turtle 134,825 7bc38bb01c5608c9d2ebe04d0e71af51
pro-wormbase-closeMatch-linkset pro-wormbase-closeMatch-linkset.ttl text/turtle 406,718 c557490f77a7e49eba28ed19df3e9157
void.rdf void.rdf application/rdf+xml 517,047 3365854ac12b760514758649ac9550d7
void void.ttl text/turtle 154,508 060c1fc71caca022cd60968a4dffdb97