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Protein Ontology Linked Open Data

Data Dumps

Release 59.0 (2019-09-23)
(see VoID.ttl for Dataset descriptions. Previous releases can be found here)
Dataset RDF Metrics (Virtuoso)
Named Graph Triples Classes Entites Subjects Predicates Objects
pro <http://purl.obolibrary.org/obo/pr> 11,757,623 8 1,979,206 2,267,398 45 3,107,008
paf <http://pir.georgetown.edu/pro/paf> 91,406 4 8,597 19,733 22 31,300
pro-ensembl-closeMatch-linkset <https://lod.proconsortium.org/ensembl-closeMatch> 48 0 0 24 2 24
pro-ensemblbacteria-closeMatch-linkset <https://lod.proconsortium.org/ensemblbacteria-closeMatch> 1,758 0 0 493 2 879
pro-hgnc-closeMatch-linkset <https://lod.proconsortium.org/hgnc-closeMatch> 36,540 0 0 18,268 2 18,270
pro-mgi-closeMatch-linkset <https://lod.proconsortium.org/mgi-closeMatch> 31,054 0 0 15,524 2 15,527
pro-ncbigene-closeMatch-linkset <https://lod.proconsortium.org/ncbigene-closeMatch> 5,230 0 0 1,661 2 2,615
pro-reactome-closeMatch-linkset <https://lod.proconsortium.org/reactome-closeMatch> 25,674 0 0 9,215 2 12,837
pro-reactome-exactMatch-linkset <https://lod.proconsortium.org/reactome-exactMatch> 38,751 0 0 10,081 3 12,917
pro-rgd-closeMatch-linkset <https://lod.proconsortium.org/rgd-closeMatch> 14,708 0 0 7,352 2 7,354
pro-sgd-closeMatch-linkset <https://lod.proconsortium.org/sgd-closeMatch> 2,522 0 0 1,261 2 1,261
pro-uniprotkb-closeMatch-linkset <https://lod.proconsortium.org/uniprotkb-closeMatch> 273,866 0 0 54,858 2 132,802
pro-uniprotkb-exactMatch-linkset <https://lod.proconsortium.org/uniprotkb-exactMatch> 525,501 0 0 175,164 3 169,310
pro-uniprotkbvar-closeMatch-linkset <https://lod.proconsortium.org/uniprotkbvar-closeMatch> 938 0 0 40 2 469
pro-uniprotkbvar-exactMatch-linkset <https://lod.proconsortium.org/uniprotkbvar-exactMatch> 1,407 0 0 469 3 469
pro-wormbase-closeMatch-linkset <https://lod.proconsortium.org/wormbase-closeMatch> 3,518 0 0 1,759 2 1,759
void <https://sparql.proconsortium.org/.well-known/void> 2242 7 74 292 62 606

SPARQL queries used to calculate statistics can be found here.


Dataset File Name Format File Size (Bytes) MD5
pro.owl pro.owl application/rdf+xml 1,164,569,821 b0c772f0e941318606be3e970bd5af8c
pro.ttl pro.ttl text/turtle 664,124,792 dbd2d045a1dd195468449b25dd8999c5
paf.rdf paf.rdf application/rdf+xml 11,837,438 4611e8f6ce1b4e2f362735c6902ff8f5
paf paf.ttl text/turtle 2,939,042 bcc1954d3c054f0d137bf649c530e3e9
pro-ensembl-closeMatch-linkset pro-ensembl-closeMatch-linkset.ttl text/turtle 3,166 f9d5b9a6001601ed2c4f702f27a13245
pro-ensemblbacteria-closeMatch-linkset pro-ensemblbacteria-closeMatch-linkset.ttl text/turtle 95,067 90f53197cc72e3876a91400c239522fe
pro-hgnc-closeMatch-linkset pro-hgnc-closeMatch-linkset.ttl text/turtle 1,649,555 954154d9137e1e720b5c3499d9517680
pro-mgi-closeMatch-linkset pro-mgi-closeMatch-linkset.ttl text/turtle 1,432,935 4ddeb2f7a691cbd863f6e09131ec0988
pro-ncbigene-closeMatch-linkset pro-ncbigene-closeMatch-linkset.ttl text/turtle 266,646 b7a8036700b2dd56c4fe1ff5462e6579
pro-reactome-closeMatch-linkset pro-reactome-closeMatch-linkset.ttl text/turtle 1,434,342 4e43945027b839f7406b046d11697ce9
pro-reactome-exactMatch-linkset pro-reactome-exactMatch-linkset.ttl text/turtle 2,094,174 71926fef92ca56615c3ec8d49b635f5a
pro-rgd-closeMatch-linkset pro-rgd-closeMatch-linkset.ttl text/turtle 668,687 0b28d6111b0e8f68d9ba706f631034f5
pro-sgd-closeMatch-linkset pro-sgd-closeMatch-linkset.ttl text/turtle 125,090 e2324102a52232de1362c78a93a8b6dd
pro-uniprotkb-closeMatch-linkset pro-uniprotkb-closeMatch-linkset.ttl text/turtle 14,058,597 1bcb6182e6451f830cf41b70929ff3ea
pro-uniprotkb-exactMatch-linkset pro-uniprotkb-exactMatch-linkset.ttl text/turtle 25,778,912 bce4545c367c191340857d282c5d2471
pro-uniprotkbvar-closeMatch-linkset pro-uniprotkbvar-closeMatch-linkset.ttl text/turtle 54,302 0a16dc983ec1c4afafc8c8c1d5a8e198
pro-uniprotkbvar-exactMatch-linkset pro-uniprotkbvar-exactMatch-linkset.ttl text/turtle 82,348 76532b886a6183944e6cbdf100a84dca
pro-wormbase-closeMatch-linkset pro-wormbase-closeMatch-linkset.ttl text/turtle 206,064 21742541aa3225c63e2720fd372c0e8b
void.rdf void.rdf application/rdf+xml 488,717 86008223dec83a0f890b79a39ba02f02
void void.ttl text/turtle 149,123 d61a94709334b8b11f0e62b1eb1ef344