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Protein Ontology Linked Open Data

Data Dumps

Release 58.0 (2019-04-18)
(see VoID.ttl for Dataset descriptions. Previous releases can be found here)
Dataset RDF Metrics (Virtuoso)
Named Graph Triples Classes Entites Subjects Predicates Objects
pro <http://purl.obolibrary.org/obo/pr> 10,719,041 8 1,840,715 2,128,319 45 3,032,496
paf <http://pir.georgetown.edu/pro/paf> 95,505 4 8,649 20,715 22 31,841
pro-ensembl-closeMatch-linkset <https://lod.proconsortium.org/ensembl-closeMatch> 20 0 0 10 2 10
pro-ensemblbacteria-closeMatch-linkset <https://lod.proconsortium.org/ensemblbacteria-closeMatch> 1,758 0 0 493 2 879
pro-hgnc-closeMatch-linkset <https://lod.proconsortium.org/hgnc-closeMatch> 36,534 0 0 18,265 2 18,267
pro-mgi-closeMatch-linkset <https://lod.proconsortium.org/mgi-closeMatch> 30,860 0 0 15,423 2 15,430
pro-ncbigene-closeMatch-linkset <https://lod.proconsortium.org/ncbigene-closeMatch> 5,242 0 0 1,663 2 2,621
pro-reactome-closeMatch-linkset <https://lod.proconsortium.org/reactome-closeMatch> 25,700 0 0 9,215 2 12,850
pro-reactome-exactMatch-linkset <https://lod.proconsortium.org/reactome-exactMatch> 38,790 0 0 10,090 3 12,930
pro-rgd-closeMatch-linkset <https://lod.proconsortium.org/rgd-closeMatch> 14,682 0 0 7,337 2 7,341
pro-sgd-closeMatch-linkset <https://lod.proconsortium.org/sgd-closeMatch> 2,528 0 0 1,264 2 1,264
pro-uniprotkb-closeMatch-linkset <https://lod.proconsortium.org/uniprotkb-closeMatch> 272,318 0 0 54,766 2 132,072
pro-uniprotkb-exactMatch-linkset <https://lod.proconsortium.org/uniprotkb-exactMatch> 523,611 0 0 174,534 3 168,727
pro-uniprotkbvar-closeMatch-linkset <https://lod.proconsortium.org/uniprotkbvar-closeMatch> 938 0 0 40 2 469
pro-uniprotkbvar-exactMatch-linkset <https://lod.proconsortium.org/uniprotkbvar-exactMatch> 1,407 0 0 469 3 469
pro-wormbase-closeMatch-linkset <https://lod.proconsortium.org/wormbase-closeMatch> 3,486 0 0 1,743 2 1,743
void <https://sparql.proconsortium.org/.well-known/void> 2,242 7 74 292 61 606

SPARQL queries used to calculate statistics can be found here.


Dataset File Name Format File Size (Bytes) MD5
pro.owl pro.owl application/rdf+xml 1,064,041,172 9b6625e794ef76065248fbdb65579b9f
pro.ttl pro.ttl text/turtle 617,570,493 7c5439338713c932561cef9733ab1698
paf.rdf paf.rdf application/rdf+xml 12,336,060 ae926e06be96641155cd3eea92b3e77b
paf paf.ttl text/turtle 3,066,590 23e65e107a87ef7542d83f3f308ab5d7
pro-ensembl-closeMatch-linkset pro-ensembl-closeMatch-linkset.ttl text/turtle 1,444 ebd03f004508ae4443a2370910732bd8
pro-ensemblbacteria-closeMatch-linkset pro-ensemblbacteria-closeMatch-linkset.ttl text/turtle 95,067 90f53197cc72e3876a91400c239522fe
pro-hgnc-closeMatch-linkset pro-hgnc-closeMatch-linkset.ttl text/turtle 1,649,284 4063975f679e3bad009381bc09884347
pro-mgi-closeMatch-linkset pro-mgi-closeMatch-linkset.ttl text/turtle 1,423,988 da3c2a59fc595ab6c4b95d62af672e4c
pro-ncbigene-closeMatch-linkset pro-ncbigene-closeMatch-linkset.ttl text/turtle 267,250 d8438797ce577f1b7116ca776beb424f
pro-reactome-closeMatch-linkset pro-reactome-closeMatch-linkset.ttl text/turtle 1,435,739 40561e00d9f84b06159636b01194bde0
pro-reactome-exactMatch-linkset pro-reactome-exactMatch-linkset.ttl text/turtle 2,096,341 54bb771dcf6f39245de4912a83d2cecb
pro-rgd-closeMatch-linkset pro-rgd-closeMatch-linkset.ttl text/turtle 667,492 469011a671e4e86f0956c0071fb14577
pro-sgd-closeMatch-linkset pro-sgd-closeMatch-linkset.ttl text/turtle 125,387 1b262e667ef9c6db9bdddbda29b9864a
pro-uniprotkb-closeMatch-linkset pro-uniprotkb-closeMatch-linkset.ttl text/turtle 13,978,793 820cdbd68f14ae51fed75767a05fec50
pro-uniprotkb-exactMatch-linkset pro-uniprotkb-exactMatch-linkset.ttl text/turtle 25,686,923 02d796b26f7c7cb2b88f0876999a153a
pro-uniprotkbvar-closeMatch-linkset pro-uniprotkbvar-closeMatch-linkset.ttl text/turtle 54,302 0a16dc983ec1c4afafc8c8c1d5a8e198
pro-uniprotkbvar-exactMatch-linkset pro-uniprotkbvar-exactMatch-linkset.ttl text/turtle 82,348 76532b886a6183944e6cbdf100a84dca
pro-wormbase-closeMatch-linkset pro-wormbase-closeMatch-linkset.ttl text/turtle 204,192 8ab708862aa3e42697ca3523c71b23e0
void.rdf void.rdf application/rdf+xml 488,714 77b0992425704a71a5c6e00ba9e4ad2a
void void.ttl text/turtle 149,120 4ccf921bf4467dc82b1c00d560320576