Protein Ontology Linked Open Data

Data Dumps

Release 70.0 (2024-08-08)
(see VoID.ttl for Dataset descriptions. Previous releases can be found here). The statistics for PRO database can be found at here.
Dataset RDF Metrics (Virtuoso)
Named Graph Triples Classes Entities Subjects Predicates Objects
pro <http://purl.obolibrary.org/obo/pr> 13,586,715 8 2,281,423 2,571,742 50 3,526,514
paf <http://pir.georgetown.edu/pro/paf> 82,603 4 7,359 17,513 22 27,834
pro-ensembl-closeMatch-linkset <https://lod.proconsortium.org/ensembl-closeMatch> 81 1 21 21 4 40
pro-ensemblbacteria-closeMatch-linkset <https://lod.proconsortium.org/ensemblbacteria-closeMatch> 2,730 1 492 492 4 1,360
pro-hgnc-closeMatch-linkset <https://lod.proconsortium.org/hgnc-closeMatch> 73,876 1 18,784 18,784 4 36,309
pro-mgi-closeMatch-linkset <https://lod.proconsortium.org/mgi-closeMatch> 64,126 1 16,328 16,328 4 31,469
pro-ncbigene-closeMatch-linkset <https://lod.proconsortium.org/ncbigene-closeMatch> 10,617 1 2,170 2,170 4 5,257
pro-reactome-closeMatch-linkset <https://lod.proconsortium.org/reactome-closeMatch> 65,007 1 11,585 11,585 4 32,241
pro-reactome-exactMatch-linkset <https://lod.proconsortium.org/reactome-exactMatch> 90,959 1 16,076 16,076 5 32,268
pro-rgd-closeMatch-linkset <https://lod.proconsortium.org/rgd-closeMatch> 30,590 1 7,770 7,770 4 15,049
pro-sgd-closeMatch-linkset <https://lod.proconsortium.org/sgd-closeMatch> 5,226 1 1,326 1,326 4 2,574
pro-uniprotkb-closeMatch-linkset <https://lod.proconsortium.org/uniprotkb-closeMatch> 413,750 1 59,099 59,099 4 193,014
pro-uniprotkb-exactMatch-linkset <https://lod.proconsortium.org/uniprotkb-exactMatch> 1,029,168 1 213,204 213,204 5 348,452
pro-uniprotkbvar-closeMatch-linkset <https://lod.proconsortium.org/uniprotkbvar-closeMatch> 1,003 1 41 41 4 500
pro-uniprotkbvar-exactMatch-linkset <https://lod.proconsortium.org/uniprotkbvar-exactMatch> 2,263 1 463 463 5 875
pro-wormbase-closeMatch-linkset <https://lod.proconsortium.org/wormbase-closeMatch> 7,529 1 1,910 1,910 4 3,710
void <https://sparql.proconsortium.org/.well-known/void> 0 0 0 0 0 0

SPARQL queries used to calculate statistics can be found here.


Dataset File Name Format File Size (Bytes) MD5
pro.owl pro.owl application/rdf+xml 1,375,428,887 16356aba77f16eec25d08f0001580c02
pro pro.ttl text/turtle 786,424,056 615e08b8ba4365053ea959e5f10378be
paf.rdf paf.rdf application/rdf+xml 10,700,328 5cdf2643122777464d8aab09c6dca5c9
paf paf.ttl text/turtle 2,697,662 ba359cd03620ace5799c9081ddf675b1
pro-ensembl-closeMatch-linkset pro-ensembl-closeMatch-linkset.ttl text/turtle 4,706 7402ad8a6daf9f58964caaf9695b6f7b
pro-ensemblbacteria-closeMatch-linkset pro-ensemblbacteria-closeMatch-linkset.ttl text/turtle 143,540 d7530008bd57ec2664dc595abca9fd1f
pro-hgnc-closeMatch-linkset pro-hgnc-closeMatch-linkset.ttl text/turtle 3,472,787 c762255083729cc3e4a32d8b4020f2d4
pro-mgi-closeMatch-linkset pro-mgi-closeMatch-linkset.ttl text/turtle 3,049,951 3716d1b6c023accfe368ffa3b985eb38
pro-ncbigene-closeMatch-linkset pro-ncbigene-closeMatch-linkset.ttl text/turtle 531,062 8b87522271b679eb5555cc89d1bec4f7
pro-reactome-closeMatch-linkset pro-reactome-closeMatch-linkset.ttl text/turtle 3,486,193 1783a5a44ebd42ede4d56291ec088dc2
pro-reactome-exactMatch-linkset pro-reactome-exactMatch-linkset.ttl text/turtle 4,912,005 05222bbe34e09a1a1f2b05c6094940f7
pro-rgd-closeMatch-linkset pro-rgd-closeMatch-linkset.ttl text/turtle 1,444,059 6470e70bc1a06d4721ca29f54951e1cf
pro-sgd-closeMatch-linkset pro-sgd-closeMatch-linkset.ttl text/turtle 260,474 28be054df6a910dd59b1933c6a47b29b
pro-uniprotkb-closeMatch-linkset pro-uniprotkb-closeMatch-linkset.ttl text/turtle 21,149,132 cdcfd7bda0769a9549a92efaa72eee13
pro-uniprotkb-exactMatch-linkset pro-uniprotkb-exactMatch-linkset.ttl text/turtle 52,738,850 31b15e4f89237aeeef3a39ffdd0040df
pro-uniprotkbvar-closeMatch-linkset pro-uniprotkbvar-closeMatch-linkset.ttl text/turtle 57,694 97774ff11540b43fdd19e8dda332ab18
pro-uniprotkbvar-exactMatch-linkset pro-uniprotkbvar-exactMatch-linkset.ttl text/turtle 134,825 7bc38bb01c5608c9d2ebe04d0e71af51
pro-wormbase-closeMatch-linkset pro-wormbase-closeMatch-linkset.ttl text/turtle 409,848 39fb977a104041274f59706bb5737ecd
void.rdf void.rdf application/rdf+xml 516,614 16928d2ab9510ffe8eb86d20a77dc6d3
void void.ttl text/turtle 154,075 e153394a250b62f8b9a04920eaf14801