Protein Ontology Linked Open Data
Data Dumps

Release 69.0 (2024-02-12)
(see VoID.ttl for Dataset descriptions. Previous releases can be found here). The statistics for PRO database can be found at here.
Dataset	RDF Metrics (Virtuoso)
Named Graph	Triples	Classes	Entities	Subjects	Predicates	Objects
pro	<http://purl.obolibrary.org/obo/pr>	13583337	8	2280881	2571158	50	3525753
paf	<http://pir.georgetown.edu/pro/paf>	82733	4	7368	17540	22	27859
pro-ensembl-closeMatch-linkset	<https://lod.proconsortium.org/ensembl-closeMatch>	81	1	21	21	4	40
pro-ensemblbacteria-closeMatch-linkset	<https://lod.proconsortium.org/ensemblbacteria-closeMatch>	2730	1	492	492	4	1360
pro-hgnc-closeMatch-linkset	<https://lod.proconsortium.org/hgnc-closeMatch>	73872	1	18783	18783	4	36307
pro-mgi-closeMatch-linkset	<https://lod.proconsortium.org/mgi-closeMatch>	64118	1	16326	16326	4	31465
pro-ncbigene-closeMatch-linkset	<https://lod.proconsortium.org/ncbigene-closeMatch>	10621	1	2171	2171	4	5259
pro-reactome-closeMatch-linkset	<https://lod.proconsortium.org/reactome-closeMatch>	65033	1	11591	11591	4	32254
pro-reactome-exactMatch-linkset	<https://lod.proconsortium.org/reactome-exactMatch>	90992	1	16082	16082	5	32281
pro-rgd-closeMatch-linkset	<https://lod.proconsortium.org/rgd-closeMatch>	30586	1	7769	7769	4	15047
pro-sgd-closeMatch-linkset	<https://lod.proconsortium.org/sgd-closeMatch>	5226	1	1326	1326	4	2574
pro-uniprotkb-closeMatch-linkset	<https://lod.proconsortium.org/uniprotkb-closeMatch>	413665	1	59083	59083	4	193000
pro-uniprotkb-exactMatch-linkset	<https://lod.proconsortium.org/uniprotkb-exactMatch>	1029029	1	213169	213169	5	348452
pro-uniprotkbvar-closeMatch-linkset	<https://lod.proconsortium.org/uniprotkbvar-closeMatch>	1003	1	41	41	4	500
pro-uniprotkbvar-exactMatch-linkset	<https://lod.proconsortium.org/uniprotkbvar-exactMatch>	2263	1	463	463	5	875
pro-wormbase-closeMatch-linkset	<https://lod.proconsortium.org/wormbase-closeMatch>	7529	1	1910	1910	4	3710
void	<https://sparql.proconsortium.org/.well-known/void>	2368	7	74	292	63	610

SPARQL queries used to calculate statistics can be found here.


Dataset	File Name	Format	File Size (Bytes)	MD5
paf.rdf	paf.rdf	application/rdf+xml	10,710,000	8cd252949a7070c19882a9cba01050f9
paf	paf.ttl	text/turtle	2,695,257	7850c77c02254804f537cf72fedd4247
pro-ensembl-closeMatch-linkset	pro-ensembl-closeMatch-linkset.ttl	text/turtle	4,706	7402ad8a6daf9f58964caaf9695b6f7b
pro-ensemblbacteria-closeMatch-linkset	pro-ensemblbacteria-closeMatch-linkset.ttl	text/turtle	143,540	d7530008bd57ec2664dc595abca9fd1f
pro-hgnc-closeMatch-linkset	pro-hgnc-closeMatch-linkset.ttl	text/turtle	3,472,572	51b17946e64aff3f956800c38129187d
pro-mgi-closeMatch-linkset	pro-mgi-closeMatch-linkset.ttl	text/turtle	3,049,548	fef14b5042365857d038805ee17dd00d
pro-ncbigene-closeMatch-linkset	pro-ncbigene-closeMatch-linkset.ttl	text/turtle	531,263	dbef43747609c68fc94baeacf873d859
pro-reactome-closeMatch-linkset	pro-reactome-closeMatch-linkset.ttl	text/turtle	3,487,627	fda5278482221fbaa7dc1845e13fab41
pro-reactome-exactMatch-linkset	pro-reactome-exactMatch-linkset.ttl	text/turtle	4,914,070	56c14707a2326cd71a13b8ff2f1bb500
pro-rgd-closeMatch-linkset	pro-rgd-closeMatch-linkset.ttl	text/turtle	1,443,813	f9fac744c2e135f29c3673dd2d0b093d
pro-sgd-closeMatch-linkset	pro-sgd-closeMatch-linkset.ttl	text/turtle	260,474	28be054df6a910dd59b1933c6a47b29b
pro-uniprotkb-closeMatch-linkset	pro-uniprotkb-closeMatch-linkset.ttl	text/turtle	21,145,222	ca482a776271c30e6f70736ff02d46c1
pro-uniprotkb-exactMatch-linkset	pro-uniprotkb-exactMatch-linkset.ttl	text/turtle	52,732,871	d08df9bb3e89747cc42ed627e7b2c34f
pro-uniprotkbvar-closeMatch-linkset	pro-uniprotkbvar-closeMatch-linkset.ttl	text/turtle	57,694	97774ff11540b43fdd19e8dda332ab18
pro-uniprotkbvar-exactMatch-linkset	pro-uniprotkbvar-exactMatch-linkset.ttl	text/turtle	134,825	7bc38bb01c5608c9d2ebe04d0e71af51
pro-wormbase-closeMatch-linkset	pro-wormbase-closeMatch-linkset.ttl	text/turtle	409,848	39fb977a104041274f59706bb5737ecd
pro.owl	pro.owl	application/rdf+xml	1,375,065,349	5b19d2e418567e376ece1c1085925c98
pro	pro.ttl	text/turtle	786,217,178	36f8a51051a76e15d448a14d6fa0b769
void.rdf	void.rdf	application/rdf+xml	517,047	e57053ea1af55cdcbefb38633496c6c1
void	void.ttl	text/turtle	154,508	785f49c4c39e4fc6fd43a64aa7eda62f